Welcome to the App Center

Look through our StrataQuest Apps and get inspired by the variety of biomedical image analysis applications. If you cannot find the perfect solution for your research question please contact us. TissueGnostics offers the development of customized Apps for your specific analysis needs. Contact us for pricing details.

Original Image
Nuclei detection
Osteoclast detection
Combined detection
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IF Cell Culture - Osteoclast
Original Image
Nuclei detection
Phenotype 1 & Phenotype 2 detection
Phenotype 1 to 2 proximity 0-5µm
Phenotype 1 to 2 direct contact
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IF CELLULAR CONTACT
Original Image
Tumor/Stroma/lymphoid cluster detection
Nuclei detection
Proximity map tumor
Proximity map lymphoid cluster
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IHC IMMUNE STATUS IN SITU
Original Image
Nuclei detection
Tumor foci detection
Vessel detection
Vessel proximities
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IF TUMOR FOCI ANGIO
Original Image
Nuclei detection
Cell detection
Dots detection
Filament detection
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IF CULTURED CELLS & SUBSTRUCTURES
Original Image
Tumor detection
Vessel detection
Combined detection
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IF TUMOR VASCULARIZATION
Original Image
Nuclei detection
Macrophage detection
Macrophage/Tumor detection
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IHC TUMOR MACROPHAGES
Original image
Nuclei detection
Tumor detection
Proximity measurements: 0-25µm
Proximity measurements: 25-50µm
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IF IMMUNE STATUS IN SITU
Original Image
Orignial image - high resolution
Vessel detection mask
Vessel detection on original image
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IF RETINAL VASCULARIZATION
Original image
Endothelial cell detection
Vessel lumen detection
Blood vessel detection
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IHC ANGIO
Original image
Nuclei detection
Cellular mask on Cy5
Cell-cell connections
Cell to cell contact
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IF CELLULAR MICROENVIRONMENT
Original Image
Gland detection
Vessel detection
Stroma detection
Combined detection
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ENDOMETRIUM HE
Original Image
Nuclei detection
EBER-ISH+ cells (pink)
Scatterplot
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EBER-ISH
Original Image
Nuclei detection
Dot detection
Cardiomyocytes (red), fibroblasts (green)
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IF CARDIO CELL CULTURE DOTS
Original Image
Nuclei detection
Dendrites detection
Axon detection
Dendrites and axon detection
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IF DENDRITES & AXONS
Original image
Nuclei and cell detection
Dot detection
Combined mask
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RNA SCOPE
Original Image
Filament detection mask
Filament detection
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IHC EXTRACELLULAR FILAMENTS
Original image
Nuclei and marker detection
Dermis/Epidermis detection
Combined mask
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IHC MACROPHAGES
Original image
Tumor detection
Vessel detection
Combined detection
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IHC TUMOR VASCULARIZATION
Original image
Nuclei detection
Epidermis detection
Dermis detection
Combined mask
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IF SKIN MORPHOLOGY
Original Image
Marker-positive cell detection
Stroma/Tumor/Necrotic tissue detection
Combined detection
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IHC NECROTIC TUMOR
Original Image
Vessel detection
Necrotic tissue detection
Tumor detection
Combined detection
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IHC NECROTIC TUMOR ANGIO
Original image
Nuclei detection
Dot marker 1 detection
Dot marker 2 detection
Combined masks
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IF DOTS
Original Image
Villi detection
Crypt detection
Villi and dot detection
Crypt and dot detection
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IHC SMALL INTESTINE - DOTS
Original Image
Spheroid/Organoid detection
Nuclei detection
Dot detection
Nuclei/cytoplasm/membrane detection
Proximity measurement
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IF SPHEROIDS
Original image
Bone detection
Chondrocyte detection
Combined detection
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BONE MINERALIZATION
Original image
Cell body detection
Neutrite/dendrites detection
Combined detection
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IF NEURITE
Original Image
Nuclei detection
Membrane detection
Nuclei & cytoplasm detection
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IF MEMBRANE
Original Image
Vessel detection
Stroma detection
Tumor detection
Tumor/Stroma/Vessel detection
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WILMS TUMOR
Original image
Nuclei and membrane detection
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IHC MEMBRANE
Original Image
Nuclei detection
Cellular mask
Cardiomyocytes (red), fibroblasts (green)
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IF CARDIO CELL CULTURE
Original Image
Vessel detection
Marker positive cell detection
Combined detection
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IHC ANGIO TRICHOME
Original Image
Nuclei/cell detection
Red dot detection
Green dot detection
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RNA SCOPE+
Original Image
Vessel detection
Collagen detection
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ANGIO SIRIUS RED 
Original image
Tumor foci detection
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TUMOR FOCI
Original Image
Rods and Cones detection
Marker-positive rods/cones detection
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IF RODS & CONES IN RETINA
Original image
Nuclei detection
Metastructure detection
Combined mask
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IHC META CELLS
Original image
Nuclei detection
Bronchiole detection
Aveoli detection
Blood vessel detection
Combined mask
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PULMO
Original Image
Blood vessel detection
Quantification
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IHC ANGIO DIAMETER
Original Image
Pyknotic nuclei detection
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IF PYKNOTIC NUCLEI
Original image
Nuclei detection
Tumor detection
Tumor cell detection
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IHC TUMOR-STROMA
Original image
Nuclei detection
Marker 1-positive cells
Marker 2-positive cells
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IHC 3
Original image
Bone detection
Osteoid detection
Combined detection
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BONE GOLDNER
Original image
Nuclei detection
Cell detection
Parasite detection
Combined mask
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IF LEISHMANIASIS
Original Image
Lumen detection
Myofibre detection
Combined detection
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IF SKELETAL MUSCLE
Original image
Bone detection
Bone marrow detection
Bone surface detection
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