Welcome to the App Center

Look through our StrataQuest Apps and get inspired by the variety of biomedical image analysis applications. If you cannot find the perfect solution for your research question please contact us. TissueGnostics offers the development of customized Apps for your specific analysis needs. Contact us for pricing details.

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Tumor/Stroma/lymphoid cluster detection
Nuclei detection
Proximity map tumor
Proximity map lymphoid cluster
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IHC IMMUNE STATUS IN SITU
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Nuclei detection
Cell detection
Dots detection
Filament detection
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IF CULTURED CELLS & SUBSTRUCTURES
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Tumor detection
Vessel detection
Combined detection
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IF TUMOR VASCULARIZATION
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Nuclei detection
Macrophage detection
Macrophage/Tumor detection
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IHC TUMOR MACROPHAGES
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Nuclei detection
Tumor detection
Proximity measurements: 0-25µm
Proximity measurements: 25-50µm
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IF IMMUNE STATUS IN SITU
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Endothelial cell detection
Vessel lumen detection
Blood vessel detection
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IHC ANGIO
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Nuclei detection
Cellular mask on Cy5
Cell-cell connections
Cell sociology
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IF CELLULAR MICROENVIRONMENT
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Nuclei detection
Dot detection
Cardiomyocytes (red), fibroblasts (green)
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IF CARDIO CELL CULTURE DOTS
Original Image
Nuclei detection
Dendrites detection
Axon detection
Dendrites and axon detection
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IF DENDRITES & AXONS
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Nuclei and cell detection
Dot detection
Combined mask
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RNA SCOPE
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Nuclei and marker detection
Dermis/Epidermis detection
Combined mask
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IHC MACROPHAGES
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Tumor detection
Vessel detection
Combined detection
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IHC TUMOR VASCULARIZATION
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Nuclei detection
Epidermis detection
Dermis detection
Combined mask
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IF SKIN MORPHOLOGY
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Nuclei detection
Dot marker 1 detection
Dot marker 2 detection
Combined masks
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IF DOTS
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Villi detection
Crypt detection
Villi and dot detection
Crypt and dot detection
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IHC SMALL INTESTINE - DOTS
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Spheroid/Organoid detection
Nuclei detection
Dot detection
Nuclei/cytoplasm/membrane detection
Proximity measurement
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IF SPHEROIDS
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Bone detection
Chondrocyte detection
Combined detection
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BONE MINERALIZATION
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Cell body detection
Neutrite/dendrites detection
Combined detection
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IF NEURITE
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Nuclei detection
Membrane detection
Nuclei & cytoplasm detection
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IF MEMBRANE
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Vessel detection
Stroma detection
Tumor detection
Tumor/Stroma/Vessel detection
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WILMS TUMOR
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Nuclei and membrane detection
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IHC MEMBRANE
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Nuclei detection
Cellular mask
Cardiomyocytes (red), fibroblasts (green)
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IF CARDIO CELL CULTURE
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Vessel detection
Marker positive cell detection
Combined detection
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IHC ANGIO TRICHOME
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Nuclei/cell detection
Red dot detection
Green dot detection
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RNA SCOPE+
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Vessel detection
Collagen detection
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ANGIO SIRIUS RED 
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Tumor foci detection
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TUMOR FOCI
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Nuclei detection
Metastructure detection
Combined mask
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IHC META CELLS
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Nuclei detection
Bronchiole detection
Aveoli detection
Blood vessel detection
Combined mask
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PULMO
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Blood vessel detection
Quantification
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IHC ANGIO DIAMETER
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Pyknotic nuclei detection
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IF PYKNOTIC NUCLEI
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Nuclei detection
Tumor detection
Tumor cell detection
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IHC TUMOR-STROMA
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Nuclei detection
Marker 1-positive cells
Marker 2-positive cells
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IHC 3
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Bone detection
Osteoid detection
Combined detection
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BONE GOLDNER
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Nuclei detection
Cell detection
Parasite detection
Combined mask
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IF LEISHMANIASIS
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Lumen detection
Myofibre detection
Combined detection
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IF SKELETAL MUSCLE
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Bone detection
Bone marrow detection
Bone surface detection
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BONE VON KOSSA
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Nuclei detection
Marker-positive cells
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IHC 2
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Glial cell detection
Combined mask
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IF GLIAL CELLS
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Nuclei detection
Cytoskeleton detection
Dot detection
Cell detection
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IF CYTOSKELETON
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Nuclei detection
Granuloma detection
Combined mask
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IF GRANULOMA
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Nuclei detection
Glomeruli detection
Proximity measurements
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IF GLOMERULI
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Nuclei detection
Marker detection
Hi-Plex marker detection
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IF HI-PLEX 50
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Nuclei detection
Cellular mask detection
Marker-positive cell detection
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IF 4
Original image
Nuclei detection
Cellular mask detection
Marker-positive cell detection
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IF 3
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Tissue detection
Lipid droplet detection
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LIPID DROPLETS
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Color separation
Membrane detection
Adipocyte detection
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IHC ADIPOCYTE
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Nuclei detection
Cellular mask detection
Marker-positive cell detection
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IF 2
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Vessel and vessel surrounding detection
Elastin detection
Collagen detection
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IHC ANGIO ELASTIN

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