IHC Necrotic Tumor
AI-based segmentation of tumor tissue into tumor, necrotic tissue, and stroma with neutrophil detection and compartment-based quantification.
metastructures
single-cell analysis
tumor microenvironment
immunophenotyping
neutrophiles, tumor, necrosis, necrotic tissue, immunophenotyping, mouse tissue
The IHC Necrotic Tumor App is able to segment tumor tissues into tumor, necrotic tissue and stroma using the AI Classifier. Furthermore, it identifies single cells as well as one additional cellular marker (e.g. Neutrophils). It outputs area of tumor, necrotic tissue and stroma. Further measurements are the number and percentage of neutrophils within the morphological entities.
Original Image
Marker-positive cell detection
Stroma/Tumor/Necrotic tissue detection
Combined detection
immunophenotyping
Webinar
20 Jan, 2026
Decoding Metastatic Potential in Colorectal Cancer Using Tissue Cytometry
tumor microenvironment
Webinar
20 Jan, 2026
Decoding Metastatic Potential in Colorectal Cancer Using Tissue Cytometry
single-cell analysis
White Paper
30 Mar, 2026
Understanding NeuroCOVID-19: SARS-CoV-2 Disrupts Astrocyte Homeostatic Functions
metastructures
Blog Post
17 May, 2023
An Intro to Deep Learning in Biomedical Imaging
We support the following file formats:
- TissueFAXS (aqproj)
- StrataFAXS II (vmic)
- PreciPoint (vmic, gtif)
- Generic BigTIFF Import
- Support for multipage BigTIFF files
- OME-TIFF
- JPEG, PNG, BMP, TIFF
- Zeiss (czi)
- Hamamatsu NanoZoomer (ndpi)
- Aperio (svs)
- Leica (scn)
- 3D HISTECH Pannoramic
- Mirax (mrxs)
- Olympus (vsi)
- More slide scanners to be added!
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Custom App development
Perfectly tailored image analysis solutions for your research.
You have a specific research question that needs to be answered? We offer custom development of image analysis pipelines for specific tasks, be it detection of cellular phenotypes or quantification of tissue structures. After discussing your goals with one of our experts, you will get a ready-to-use App and be a step closer to an impactful publication.
