IF Glial cells
Detect astrocytes and microglia in IF-stained samples and measure cell counts and the number of short and long branches per cell.
microglia, central nervous system, peripheral nervous system, phagocytosis, astrocytes, branches, fluorescence
The IF Glial Cells App allows the detection of astrocytes and microglia based on specific IF staining. The measurements assessed by the App include the number of astrocytes and microglia and the number of branches of each cell (short and long attached).
Original image
Glial cell detection
All cell types
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We support the following file formats:
- TissueFAXS (aqproj)
- StrataFAXS II (vmic)
- PreciPoint (vmic, gtif)
- Generic BigTIFF Import
- Support for multipage BigTIFF files
- OME-TIFF
- JPEG, PNG, BMP, TIFF
- Zeiss (czi)
- Hamamatsu NanoZoomer (ndpi)
- Aperio (svs)
- Leica (scn)
- 3D HISTECH Pannoramic
- Mirax (mrxs)
- Olympus (vsi)
- More slide scanners to be added!
Related Apps
IHC Microglia
Detect microglia soma in IHC-stained samples, segment branches, and identify primary and secondary branching points to quantify cell morphology and branching complexity.
microglia, central nervous system, peripheral nervous system, phagocytosis, astrocytes, branches
IF Neuronal Cells
Detect neuronal cells and reconstruct neurites/dendrites, quantify primary and secondary branches, branching points, total cell area, branch length, and branch area.
neuronal cells, microglia, central nervous system, peripheral nervous system, phagocytosis, astrocytes, branches, fluorescence
Custom App development
Perfectly tailored image analysis solutions for your research.
You have a specific research question that needs to be answered? We offer custom development of image analysis pipelines for specific tasks, be it detection of cellular phenotypes or quantification of tissue structures. After discussing your goals with one of our experts, you will get a ready-to-use App and be a step closer to an impactful publication.
