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IF Rods & Cones in Retina

Detect rods and cones based on specific staining, quantify structure number, length, and density, and measure number, percentage, and density of marker-positive rods and cones.

single-cell analysis

neuroscience

rods and cones, eye

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The IF Rods & Cones in Retina App detects the rods and cones based on specific staining. It outputs the number, density and length of detected structures as well as the number, percentage and density of marker-stained rods and cones.

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Rods and Cones detection

neuroscience

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White Paper

30 Mar, 2026

Understanding NeuroCOVID-19: SARS-CoV-2 Disrupts Astrocyte Homeostatic Functions

single-cell analysis

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White Paper

30 Mar, 2026

Understanding NeuroCOVID-19: SARS-CoV-2 Disrupts Astrocyte Homeostatic Functions

We support the following file formats:

  • TissueFAXS (aqproj)
  • StrataFAXS II (vmic)
  • PreciPoint (vmic, gtif)
  • Generic BigTIFF Import
  • Support for multipage BigTIFF files
  • OME-TIFF
  • JPEG, PNG, BMP, TIFF
  • Zeiss (czi)

  • Hamamatsu NanoZoomer (ndpi)
  • Aperio (svs)
  • Leica (scn)
  • 3D HISTECH Pannoramic
  • Mirax (mrxs)
  • Olympus (vsi)
  • More slide scanners to be added!

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IF Glial cells

Detect astrocytes and microglia in IF-stained samples and measure cell counts and the number of short and long branches per cell.

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Detect blood vessels based on appropriate stains (e.g. CD31) in retinal tissue, and quantify vessel area, density and length.

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Custom App development

Perfectly tailored image analysis solutions for your research.

You have a specific research question that needs to be answered? We offer custom development of image analysis pipelines for specific tasks, be it detection of cellular phenotypes or quantification of tissue structures. After discussing your goals with one of our experts, you will get a ready-to-use App and be a step closer to an impactful publication.

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TissueGnostics GmbH
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+43 1 216 11 90
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About Us

TissueGnostics provides advanced solutions for whole-slide imaging and image analysis in biological and clinical research. Our products help researchers to scan and analyze complex tissue samples, enabling more detailed insights into tissue structure, cellular interactions, and spatial cell landscape.

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