
IF Insulin Islet
Detect insulin islets and whole tissue in IF samples, segment nuclei using deep learning, and quantify islet number, area, total cells, and marker-specific phenotypes in tissue and within islets.
metastructures
single-cell analysis
immunophenotyping
insulin islets, pancreas, beta-cells

The IF Insulin Islet App allows for detection marker stained insulin islets, the whole tissue, and cellular phenotypes stained by specific markers within the insulin islets. The App outputs, whole tissue area (µm2), number and area (µm2) of detected insulin islets. Number of cells and marker-specific phenotypes in the whole tissue as well as within the insulin islets.
Image courtesy of Emma Hamilton-Williams, The University of Queensland, Australia
immunophenotyping

Webinar
20 Jan, 2026
Decoding Metastatic Potential in Colorectal Cancer Using Tissue Cytometry
single-cell analysis

White Paper
30 Mar, 2026
Understanding NeuroCOVID-19: SARS-CoV-2 Disrupts Astrocyte Homeostatic Functions
metastructures

Blog Post
17 May, 2023
An Intro to Deep Learning in Biomedical Imaging
We support the following file formats:
- TissueFAXS (aqproj)
- StrataFAXS II (vmic)
- PreciPoint (vmic, gtif)
- Generic BigTIFF Import
- Support for multipage BigTIFF files
- OME-TIFF
- JPEG, PNG, BMP, TIFF
- Zeiss (czi)
- Hamamatsu NanoZoomer (ndpi)
- Aperio (svs)
- Leica (scn)
- 3D HISTECH Pannoramic
- Mirax (mrxs)
- Olympus (vsi)
- More slide scanners to be added!
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IHC Insulin Islets
The IHC Insulin Islet App detects marker-stained insulin islets, tissue area, and cell phenotypes within and outside the islets. Outputs include tissue and islet area, cell counts, and phenotype distribution.
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Detect granulomas using nuclear structure analysis and IF markers (e.g. CD11c, CD68), measure granuloma number, area, and density, and export up to 20 intensity, statistic, and morphometric parameters per cell compartment.
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IHC Membrane
Unmix up to three markers in IHC/HC slides, segment cells into nucleus, perinuclear area, cytoplasm, and membrane (e.g. HER2/neu), measure up to 20 intensity, statistic, and morphometric parameters per compartment plus membrane intensity and angle.
HER2, breast cancer, immunohistochemistry, automated scoring

Custom App development
Perfectly tailored image analysis solutions for your research.
You have a specific research question that needs to be answered? We offer custom development of image analysis pipelines for specific tasks, be it detection of cellular phenotypes or quantification of tissue structures. After discussing your goals with one of our experts, you will get a ready-to-use App and be a step closer to an impactful publication.



