IF Dendrites & Axons
Detect neurons, segment dendrites and axons, and quantify dendrite number per neuron and total dendrite and axon length.
dendrites, neuron, axon, neuroscience, cell culture, primary dentrites, secondary dentrites, branches
The IF Dendrites & Axons App identifies neuronal cells and their dendrites as well as their axon based on appropriated markers. It quantifies the number of dendrites branching out from a specific neuron. As outcome total number of dendrites per neurons as well as length of dendrites and axons are provided.
Courtesy of Thomas Bastian, PhD, University of Minnesota
Original Image
Nuclei detection
Dendrites detection
Axon detection
Dendrites and axon detection
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Quantitative Analysis of Cultured Cells
We support the following file formats:
- TissueFAXS (aqproj)
- StrataFAXS II (vmic)
- PreciPoint (vmic, gtif)
- Generic BigTIFF Import
- Support for multipage BigTIFF files
- OME-TIFF
- JPEG, PNG, BMP, TIFF
- Zeiss (czi)
- Hamamatsu NanoZoomer (ndpi)
- Aperio (svs)
- Leica (scn)
- 3D HISTECH Pannoramic
- Mirax (mrxs)
- Olympus (vsi)
- More slide scanners to be added!
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