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    HARDWARE & SOFTWARE


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key

SIMPLICITY
IS KEY.

APPs

SELECTION OF STRATAQUEST APPs

  • IF COEXPRESSION APP

    IHC ADIPOCYTE APP

    The IHC Adipocyte APP quantifies adipocytes as to their lumen in adequate HE samples. Small rips in adipocyte membranes are mended automatically and cell membrane artefacts in adipocyte lumina are automatically eliminated as are lumina on sample borders. The APP outputs area measurements for all detected adipocyte lumina.

    APP Category 1

  • IF COEXPRESSION APP

    IHC MULTI-SHADES APP

    The IHC Multi-Shades APP provides semi-automatic color separation for up to six markers or colors in an IHC or HC digital Slide. In the above sample it has been used to detect and segment different levels of ossification based on Azan stain. Each detected area is measured for up to 20 intensity, statistic and morphometric parameters simultaneously.

    APP Category 1

  • IF COEXPRESSION APP

    CLASSIFIER APP

    The Classifier APP is based on trainable Deep Learning technology and provides tissue metastructure detection. In the above example it separates colon tissue into crypts, stroma and infiltration areas. Combined with the IHC2 cellular detection APP the Ki-67+ nuclei in each compartment can be quantitatively analyzed for up to 20 parameters.

    APP Category 3

  • IF COEXPRESSION APP

    IHC ANGIO APP

    The IHC Angio APP detects blood vessels based on appropriate stains (e.g. CD31) and measures overall vessel area as well as lumen area. The vessel detection also can be set to close open stained vessel walls and to connect separated vessel sections within a definable distance. The APP outputs number and vessel density and areas of vessels, endothelium and lumina.

    APP Category 2

  • IF COEXPRESSION APP

    IF COEXPRESSION+ APP

    The IF CoExpression+ APP provides single cell based coexpression analysis for multiple immunofluorescent markers (the number is technically unlimited). It segments cells into nucleus, and/or perinuclear area and/or cytoplasm, as well as into membrane. Each segmented cell compartment is measured for up to 20 intensity, statistic and morphometric parameters which can be displaayed in scattergrams and histograms and exported.

    APP Category 2

  • IF COEXPRESSION APP

    IF DOTS APP

    The IF Dots APP provides dot detection per cell within the cell compartments for up to four markers in a sample (e.g. FISH, RNA, oil droplets). Each segmented cell compartment is measured for up to 20 intensity, statistic and morphometric parameters. Dot measurement parameters are provided per cell compartment (e.g. nucleus, cytoplasm) and include count, mean intensity, total dot area, and sum of intensity as well as area and intensity lists for all single dots.

    APP Category 2

  • IF COEXPRESSION APP

    IHC META.CELLS APP

    The IHC Meta.Cells APP combines the detection of IHC/HC stained metastructures (e.g. Langerhans islets) with single cell detection (segmentation of cells into nucleus, and/or perinuclear area and/or cytoplasm). Detected cells can be classified and visualized as being either within or outside of detected metastructures. Each detected area and cell compartment is measured for up to 20 intensity, statistic and morphometric parameters.

    APP Category 2

  • IF COEXPRESSION APP

    IF IMMUNE STATUS IN SITU APP

    The IF Immune Status in Situ APP provides phenotypic characterization of immune cells in reference to detected metastructures (e.g. tumors, glands) and measures the distance of detected cellular objects to the metastructure boundary (within and/or outside). Distance ranges can be defined. Each segmented cell compartment is measured for up to 20 intensity, statistic and morphometric parameters, as is the distance of each cell to the areas boundary.

    APP Category 3

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Contact

TissueGnostics GmbH
Taborstra├če 10/2/8
1020 Vienna, Austria
+43 1 216 11 90
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