IF Retinal Vasculature
Detect blood vessels based on appropriate stains (e.g. CD31) in retinal tissue, and quantify vessel area, density and length.
metastructures
vascularization
retina, blood vessels, CD31, vascularization
The IF Retinal Vasculature App detects blood vessels based on appropriate stains (e.g. CD31) in retinal tissue. The APP outputs vessel area, vessel density as well as the vessel length.
Original Image
Original Image - High Resolution
Vessel detection mask
Vessel detection on original image
vascularization
Application Note
01 Jun, 2023
Evaluating the Distance of Tumor Cells from Blood Vessels
metastructures
Blog Post
17 May, 2023
An Intro to Deep Learning in Biomedical Imaging
We support the following file formats:
- TissueFAXS (aqproj)
- StrataFAXS II (vmic)
- PreciPoint (vmic, gtif)
- Generic BigTIFF Import
- Support for multipage BigTIFF files
- OME-TIFF
- JPEG, PNG, BMP, TIFF
- Zeiss (czi)
- Hamamatsu NanoZoomer (ndpi)
- Aperio (svs)
- Leica (scn)
- 3D HISTECH Pannoramic
- Mirax (mrxs)
- Olympus (vsi)
- More slide scanners to be added!
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Custom App development
Perfectly tailored image analysis solutions for your research.
You have a specific research question that needs to be answered? We offer custom development of image analysis pipelines for specific tasks, be it detection of cellular phenotypes or quantification of tissue structures. After discussing your goals with one of our experts, you will get a ready-to-use App and be a step closer to an impactful publication.
