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White Paper

01 May, 2025

Epigenetic Carcinogenesis: Quantitative Insights from HistoQuest Analysis

The evolving understanding of cancer biology underscores the pivotal role of epigenetic modifications - heritable yet reversible changes in gene expression that do not alter the DNA sequence.

single-cell analysis

tumor microenvironment

oncology

biomarker discovery

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Customer Publication

15 Apr, 2025

CD39+CD8+ T Cells as a Marker for Diagnosis and Prognosis of ESCC

A research group in China analyzed CD39+CD8+ T cells in esophageal squamous cell carcinoma. Based on mIF-stained samples acquired on the TissueFAXS platform, they propose these cells as new markers for diagnosis and prognosis.

oncology

biomarker discovery

immunophenotyping

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Customer Publication

09 Apr, 2025

TCL1A+ B Cells Are Critical for TLS Formation and the Prognosis of OSCC

Researchers demonstrate TCL1A+ B cells drive TLS formation in OSCC and serve as a positive prognostic factor using mIF and TissueFAXS imaging.

oncology

biomarker discovery

multiplex IF

immunology

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Webinar

04 Feb, 2025

Using Tissue Cytometry for Investigation of Fatty Liver Disease

This webinar explores how tissue cytometry enables investigation of fatty liver disease, providing insights into liver pathology and immune interactions.

tissue slide scanners

biomarker discovery

immunology

disease modeling

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Blog Post

15 Jan, 2025

Using Contextual Imaging to Quantify Cell Density

This study highlights how contextual imaging with multiplexed immunofluorescence and automated analysis quantifies cell density and spatial distributions in ESCC. Results reveal MRPL13’s link to CD8+ T-cell infiltration in the tumor microenvironment.

spatial analysis

tumor microenvironment

biomarker discovery

multiplex IF

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White Paper

30 Oct, 2024

Improving the Efficacy of Immunotherapy in Lung Cancer Through Novel Target Discoveries

Researchers from Soochow University investigated the B7-H4/USP2a axis in lung cancer using TissueFAXS Spectra for TMA imaging and StrataQuest for protein expression analysis.

image analysis

tumor microenvironment

oncology

biomarker discovery

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Customer Publication

06 Aug, 2024

Unlocking the Potential of HHLA2 in Laryngeal Squamous Cell Carcinoma

Researchers investigated HHLA2 as a prognostic marker in LSCC using multiplexed IHC on TMA cores. TissueFAXS automated imaging and StrataQuest analysis revealed HHLA2 expression across immune cell populations.

oncology

biomarker discovery

immunophenotyping

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Blog Post

19 Feb, 2024

Key Applications of TMA Samples in Tissue-Based Research

Tissue microarrays (TMAs) enable high-throughput analysis of hundreds of samples on a single slide. Combined with automated scanning and StrataQuest image analysis, TMAs streamline diagnostics, biomarker discovery, and tissue classification in research and clinics.

high-throughput imaging

oncology

biomarker discovery

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Blog Post

12 Feb, 2024

Exploring the Tissue Microenvironment with High-throughput Cytometers

High-throughput tissue cytometry enables researchers to explore complex tissue microenvironments and discover novel biomarkers. With systems like TissueFAXS SL and StrataQuest analysis, large-scale scanning and advanced spatial analysis become efficient and precise.

high-throughput imaging

spatial analysis

biomarker discovery

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White Paper

12 Oct, 2023

Type I interferon and CD8+ T cell detection predicts response to neoadjuvant treatment of rectal adenocarcinoma

A new study shows that combining type I interferon (MxA) expression with CD8+ T cell density can predict patient response to neoadjuvant treatment in rectal adenocarcinoma. TissueFAXS CHROMA and StrataQuest enabled precise multispectral imaging and analysis.

oncology

biomarker discovery

multiplex IF

immunology

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Customer Publication

12 Aug, 2023

Promising New Treatment Option for Metastatic Prostate Cancer

Pencik et al. identified STAT3 as a potential target for treating lethal metastatic prostate cancer. Tissue cytometry solutions were used to assess STAT3 and pathway markers in situ.

oncology

biomarker discovery

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Customer Publication

10 Aug, 2023

Evaluating Precision Medicine in Advanced Prostate Cancer

Dr. Rupert Ecker co-authored a review on genomic and phenotypic biomarkers guiding precision medicine in advanced prostate cancer, highlighting strategies for diagnosis, prognosis, and treatment prediction.

oncology

biomarker discovery

precision medicine

expert insights

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White Paper

12 Jun, 2023

Activated Erk 1/2 Kinases Decrease Cell Viability Caused by Erastin in HNSCC

A recent study using TissueFAXS and HistoQuest revealed that xCT inhibition by erastin may trigger ferroptosis in HNSCC cells. Erk1/2 activation sensitized tumor cells to this process, suggesting novel therapeutic strategies for head and neck cancer.

single-cell analysis

oncology

biomarker discovery

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Customer Publication

24 Mar, 2023

AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma

Zhou et al. applied AI-assisted analysis to pancreatic adenocarcinoma, quantifying CD8+ TILs, cancer stem cells, and tumor budding. StrataQuest revealed immune and tumor features predictive of patient survival.

tumor microenvironment

oncology

biomarker discovery

AI-powered analysis

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Customer Publication

24 Feb, 2023

CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer

Lin et al. investigated the UHRF1/DNMT1–MZF1 axis and its effect on CpG methylation of protease serine 3 isoforms in lung cancer. Using 7-marker multiplex staining with TissueFAXS SPECTRA and StrataQuest, they differentiated isoforms showing paradoxical effects.

oncology

biomarker discovery

multiplex IF

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Customer Publication

16 Jan, 2023

Activated Erk 1/2 Kinases Decrease Cell Viability Caused by Erastin

Savic et al. studied the role of Erk 1/2 kinases in ferroptosis induction in HNSCC. They found erastin to be a potent ferroptosis inducer, strongly dependent on Erk 1/2 activity. IHC-stained samples were quantified using TissueFAXS and HistoQuest.

cell quantification

oncology

biomarker discovery

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Customer Publication

11 Nov, 2022

COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma

Yan et al. identified COL8A1 as a potential biomarker of poor chemotherapy response and survival in PDAC. TissueFAXS and StrataQuest enabled imaging and segmentation of tumor structures.

tissue segmentation

oncology

biomarker discovery

precision medicine

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Customer Publication

08 Nov, 2022

Expression and clinical significance of VISTA, B7-H3, and PD-L1 in glioma

Wang et al. investigated RNA and protein expression of immune checkpoint molecules in glioma, highlighting prognostic value. TissueFAXS SPECTRA enabled multispectral TMA scanning, and StrataQuest was used for in-depth phenotyping.

multispectral-imaging

oncology

biomarker discovery

immunophenotyping

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TissueGnostics provides advanced solutions for whole-slide imaging and image analysis in biological and clinical research. Our products help researchers to scan and analyze complex tissue samples, enabling more detailed insights into tissue structure, cellular interactions, and spatial cell landscape.

 

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