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White Paper

01 May, 2025

Epigenetic Carcinogenesis: Quantitative Insights from HistoQuest Analysis

The evolving understanding of cancer biology underscores the pivotal role of epigenetic modifications - heritable yet reversible changes in gene expression that do not alter the DNA sequence.

single-cell analysis

tumor microenvironment

oncology

biomarker discovery

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Webinar

05 Feb, 2024

Unveiling the Dichotomous Role of STAT3 Signaling in Prostate Cancer

Dr. Lukas Kenner presents his research on STAT3’s dual role in prostate cancer. TissueFAXS, HistoQuest, and StrataQuest enabled whole-slide imaging and single-cell quantification.

single-cell analysis

cell quantification

oncology

precision medicine

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News

16 Oct, 2023

Deep Learning for Improved Nuclei Segmentation in Microscopic Images

Dr. Amirreza Mahbod presents how deep learning enhances nuclei segmentation and tackles challenges in histological image analysis.

single-cell analysis

image analysis

AI-powered analysis

expert insights

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Blog Post

09 Oct, 2023

Revolutionizing Tissue Analysis: Image-Based Cytometry

Image-based cytometry is transforming tissue analysis by combining microscopy with flow cytometry features. It enables rapid, automated characterization of cells in their native environment, advancing pathology, oncology, and precision medicine with AI integration.

single-cell analysis

tissue slide scanners

cell phenotyping

digital pathology

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White Paper

12 Jun, 2023

Activated Erk 1/2 Kinases Decrease Cell Viability Caused by Erastin in HNSCC

A recent study using TissueFAXS and HistoQuest revealed that xCT inhibition by erastin may trigger ferroptosis in HNSCC cells. Erk1/2 activation sensitized tumor cells to this process, suggesting novel therapeutic strategies for head and neck cancer.

single-cell analysis

oncology

biomarker discovery

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Blog Post

23 Jan, 2023

An Introduction to Spatial Tissue Cytometry

Spatial tissue cytometry preserves cells in their native environment, enabling single-cell analysis and spatial insights into tissue organization. Discover how TG’s imaging and analysis platforms unlock powerful applications in research and precision medicine.

single-cell analysis

spatial analysis

tissue cytometry

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Webinar

12 Oct, 2022

Quantitative Image-based Cytometry: Focus on the Foci!

Prof. Nicolas C. Hoch, University of Sao Paulo, is presenting his research on signaling and repair of DNA damage. He and his group are utilizing the power of TissueFAXS i PLUS slide scanning and the high-end image analysis solution, StrataQuest, for their research.

fluorescence

single-cell analysis

image analysis

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Application Note

04 Oct, 2022

High-content phenotyping with Imaging Mass Cytometry

StrataQuest enables high-content image analysis of IMC datasets. This case study demonstrates single-cell and proximity measurements across 30 markers within one tissue section for comprehensive phenotyping.

single-cell analysis

spatial analysis

multiplex IF

imaging mass cytometry

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White Paper

15 Jun, 2022

Comprehensive Tissue Cytometry Analysis of CD3+ T cells in Lungs of COVID-19 Patients

This white paper details the first in-depth tissue cytometry analysis of CD3+ T-cell subsets in COVID-19 lungs. Using TissueFAXS PLUS and StrataQuest, researchers uncovered dysfunctional CD8+ T cells and expansion of cytotoxic CD4+ T cells driving impaired immunity.

cell-to-cell interaction

single-cell analysis

spatial analysis

immunology

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Interview

11 May, 2022

Disrupted B and T Cell Dynamics in COVID-19 Lymph Nodes Revealed by Tissue Cytometry

Dr. Thomas Diefenbach and colleagues at the Ragon Institute analyzed B and T cell populations in COVID-19 patient lymph nodes using TissueFAXS and StrataQuest. Their microscopy and image analysis revealed disrupted germinal centers and impaired humoral immunity.

single-cell analysis

image analysis

immunology

infectious diseases

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Webinar

06 Apr, 2022

Analysis of tumour initiating cells and syngeneic EPSC-derived neural stem cells in glioblastoma

Claire Vinel, PhD (Queen Mary University London), presents her Nature Communications study on epigenetic mechanisms in glioblastoma. The work highlights Treg recruitment via glycosaminoglycans and identifies druggable, patient-specific targets using integrated transcriptome and methylome analysis.

single-cell analysis

oncology

neuroscience

biomarker discovery

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Customer Publication

08 Feb, 2022

Differential localization and limited cytotoxic potential of duodenal CD8+ T cells

A study in The Journal of Clinical Investigation (Mvaja et al.) shows the limited potential of duodenal CD8+ T cells in people living with HIV. High-content immunophenotyping was performed using TissueFAXS i PLUS and TissueQuest single-cell analysis.

single-cell analysis

spatial analysis

immunophenotyping

infectious diseases

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Blog Post

07 Dec, 2021

What is Multispectral Cytometry?

Multispectral cytometry resolves spectral overlap to enable accurate, high-parameter analysis of cells and tissues. Learn how this technology, paired with spectral unmixing and advanced imaging, expands applications from cancer research to immunotherapy.

single-cell analysis

multispectral-imaging

cell phenotyping

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Customer Publication

12 Oct, 2021

Tissue Cytometry in HIV Research

Collins et al. (Ragon Institute, Harvard/MIT/MGH) reveal key virologic and immunologic factors of durable HIV control. HIV+ lymph nodes were visualized via RNAScope and acquired using TissueFAXS Q (Cell Press).

single-cell analysis

immunology

infectious diseases

RNAScope

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Customer Publication

13 Apr, 2021

Analysis of Epigenetic Signatures of Regulatory T Cells

Researchers at University of Regensburg identified a tissue-resident Treg subpopulation linked to wound healing. StrataQuest image analysis quantified epidermal repair processes in the stratum corneum.

single-cell analysis

immunology

regenerative medicine

dermatology

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TissueGnostics provides advanced solutions for whole-slide imaging and image analysis in biological and clinical research. Our products help researchers to scan and analyze complex tissue samples, enabling more detailed insights into tissue structure, cellular interactions, and spatial cell landscape.

 

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