EBER-ISH
Detect nuclei and identify EBER-ISH–positive cells in EBV-stained tissue, and quantify total cell number, and number, density, and percentage of positive cells.
single-cell analysis
dot detection
EBER-ISH probes, Epstein-Barr virus (EBV), infection
The EBER-ISH APP is specifically designed to analyse tissue samples stained by EBER-ISH probes. These probes vizualize the Epstein-Barr virus (EBV) EBER RNA. The EBER-ISH App first identifies nuclei and next detects EBER-ISH positive nuclei. The measurements provided by the APP are number of detected cells as well as the number, density and % of EBER-ISH positive cells.
Original Image
Nuclei detection
EBER-ISH+ cells (pink)
Scatterplot
dot detection
Blog Post
15 Feb, 2023
Applications of AI in Cell Segmentation
single-cell analysis
White Paper
30 Mar, 2026
Understanding NeuroCOVID-19: SARS-CoV-2 Disrupts Astrocyte Homeostatic Functions
We support the following file formats:
- TissueFAXS (aqproj)
- StrataFAXS II (vmic)
- PreciPoint (vmic, gtif)
- Generic BigTIFF Import
- Support for multipage BigTIFF files
- OME-TIFF
- JPEG, PNG, BMP, TIFF
- Zeiss (czi)
- Hamamatsu NanoZoomer (ndpi)
- Aperio (svs)
- Leica (scn)
- 3D HISTECH Pannoramic
- Mirax (mrxs)
- Olympus (vsi)
- More slide scanners to be added!
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IF Dots
Detect dots-stainings per cell in up to four markers, segment cellular compartments, measure up to 20 intensity, statistic, and morphometric parameters, and quantify dot count, mean intensity, total area, intensity sum, and per-dot area/intensity per compartment.
cell culture, breast cancer, fluorescence, HER2
Custom App development
Perfectly tailored image analysis solutions for your research.
You have a specific research question that needs to be answered? We offer custom development of image analysis pipelines for specific tasks, be it detection of cellular phenotypes or quantification of tissue structures. After discussing your goals with one of our experts, you will get a ready-to-use App and be a step closer to an impactful publication.
