Checkpoint Molecules Predict Response to Immunotherapy in Cancer

FEATURED PUBLICATION

Checkpoint Molecules Predict Response to Immunotherapy in Cancer
cells

Heij et al. investigated the expression of checkpoint molecules in the tumor microenvironment of intrahepatic cholangio-carcinoma. They found that co-expression patterns of checkpoint molecules such as PD-L1 and TIGIT correlate with metastases and poor prognosis. TissueFAXS and StrataQuest were used to image the mIF-stained samples and assess protein expression.

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Community-developed Checklists Enhance Reproducibility of Microscopy Images

FEATURED PUBLICATION

Community-developed checklists for publishing images and image analyses
Nature Methods

QUAREP-LiMi is an initiative focused on promoting quality assessment and reproducibility for instruments and images in light microscopy. Dr. Rupert Ecker, CEO of TissueGnostics, participated in developing standardized guidelines for best practices in image communication. These checklists offer key recommendations on image formatting and annotation among others.

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AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma

FEATURED PUBLICATION

AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma
Cancer Biology & Medicine

To predict survival of patients with pancreatic adenocarcinoma, Zhou et al. performed an AI-assisted comprehensive analysis of CD8+ T cells, cancer stem cells (CSCs), and tumor budding (TB). They used StrataQuest image analysis software to automatically detect and quantify tumor-infiltrating CD8+ T cells, CD133+ CSCs, and CK19+ TB.

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Characterization of the Spatial Immune Context of Lung Cancer

FEATURED PUBLICATION

Characterization of the Spatial Immune Context of Lung Cancer
International Journal of Molecular Sciences

In a recent study, Imamura et al. investigated the role of debrin-expressing tumor infiltration lymphocytes (TIL) in lung cancer. The high-end image analysis solution, StrataQuest, was used for the automatic tissue classification and localization of CD3+/debrin+ cellular phenotypes in the tumor cell nest, as well as in the stroma.

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COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma

FEATURED PUBLICATION

COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma
Matrix Biology

Yan et al. investigated several collagen subtypes involved in pancreatic ductal adenocarcinoma desmoplasia. Based on this study, COL8A1 was suggested as a new marker for predicting poor chemotherapy responsiveness and survival. The TissueFAXS imaging platform and StrataQuest analysis solution were used to image and segment morphological structures.

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Erk1/2-Dependent HNSCC Cell Susceptibility to Erastin-Induced Ferroptosis

FEATURED PUBLICATION

Erk1/2-Dependent HNSCC Cell Susceptibility to Erastin-Induced Ferroptosis
cells

Savic et al. investigated the Erk 1/2 pathway role in ferroptosis induction by targeting xCT protein during the treatment of HNSCC. They found erastin to be a potent ferroptosis inducer which is strongly dependent on Erk 1/2 kinases. TissueFAXS and HistoQuest were used to image the IHC-stained samples and calculate the percentage of xCT-positive cells.

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Tumor Microenvironment Characterization of Rectal Cancer

FEATURED PUBLICATION

Case Report: Tumor Microenvironment Characterization of Rectal Cancer
Frontiers in Immunology

Song et al. published a case study investigating the genetics and tumor microenvironment of a rectal cancer patient with MSS/PD-L1-negative recurrent hepatopulmonary metastasis. TissueFAXS and StrataQuest were used to image stained tissue samples and to assess tumor infiltrating immune cells using, among others, CD4, CD8, CD163, PD1, and PD-L1 as markers.

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Adverse Effects of Single

FEATURED PUBLICATION

The impact of HIV infection on the frequencies, function, spatial localization and heterogeneity of TFRs within human lymph nodes
BMC Immunology

Mahlobo et al. published a study in BMC Immunology addressing the effect of HIV infections on frequencies, function, spatial localization and heterogeneity of T follicular regulatory cells (TFRs) in human lymph nodes. TFRs within lymph node tissues were quantified using TissueFAXS i PLUS and TissueQuest.

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Temporal changes

FEATURED PUBLICATION

Temporal changes in T cell subsets and expansion of cytotoxic CD4+ T cells in the lungs in severe COVID-19
Clinical Immunology

Kaneko et al. published a study in the Clinical Immunology journal focusing on the quantitative analysis of T-cell subset alterations in thoracic lymph nodes and lung samples of COVID-19 patients. With the help of TissueFAXS and StrataQuest, the authors were first to show the expansion of cytotoxic CD4+ T cells in the lungs of patients with severe COVID-19.

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Spatial Distribution

FEATURED PUBLICATION

Spatial distribution and functional analysis define the action pathway of Tim-3/Tim-3 ligands in tumor development
Molecular Therapy

In a recent publication in the journal Molecular Therapy, Wang et al (Cheeloo Medical College of Shandong University) combine multiplexing and TissueGnostics’ image cytometry solutions for the assessment of the expression level of Tim-3, a well-known immune checkpoint, in tumor infiltrating lymphocytes. This study nominates Tim-3 as a potential target for cancer immunotherapy.

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Multi-Antigen Imaging

FEATURED PUBLICATION

Multi-Antigen Imaging Reveals Inflammatory DC, ADAM17 and Neprilysin as Effectors in Keloid Formation
International Journal of Molecular Sciences

In a recent publication in the MDPI - International Journal of Molecular Sciences, Rath et al (University Hospital Heidelberg) combine multiplexing, TissueGnostics’ image cytometry and in-depth data mining to characterize the immune microenvironment including spatial relationships within keloid lesions. Using this approach, the authors were able to nominate potential therapeutic targets.

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SynNotch-CAR T

FEATURED PUBLICATION

SynNotch-CAR T cells overcome challenges of specificity, heterogeneity, and persistence in treating glioblastoma
Science Translational Medicine

A recent publication from the group of Choe et al. (University of California, UCSF) published in Science Translational research is exploring the therapeutic effectiveness of SynNotch-CAR T cells in a PDX glioblastoma mouse model. T cells in-situ were imaged/assessed by TissueFAXS and quantified via StrataQuest.

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CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer

FEATURED PUBLICATION

CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer
Acta Pharmaceutica Sinica B

Lin et al. investigated the UHRF1/DNMT1–MZF1 axis in the context of CpG methylation of protease serine 3, a protein with several isoforms that show paradoxical effects. To differentiate the isoforms, the researchers employed 7-marker multiplex staining and performed a quantitative analysis using TissueFAXS SPECTRA and StrataQuest.

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Customer Publications (A total of 3421 papers published)

Results 1411 - 1420 of 3421
1411
Prenatal infection predisposes offspring to enhanced susceptibility to imiquimod-mediated psoriasiform dermatitis in mice

S Yu, CW Lee, YA Li, TH Chen, HS Yu

Dermatologica Sinica (Taiwanese Society for Investigative Dermatology) Taiwan , 30 March 2022

Dermatology

Key words: Bacterial infection, lipopolysaccharide, polyinosinic:polycytidylic acid, psoriasis, psoriatic arthritis, viral infection

Organism: Mouse

Tissue: Skin

Pathological State: Psoriasis

1412
Temporal changes in T cell subsets and expansion of cytotoxic CD4+ T cells in the lungs in severe COVID-19

N Kaneko, J Boucau, HH Kuo, C Perugino, VS Mahajan, JR Farmer, H Liu, TJ Diefenbach, A Piechocka-Trocha, K Lefteri, MT Waring, KR Premo, BD Walker, JZ Li, G Gaiha, XG Yu, M Lichterfeld, RF Padera Jr, S Pillai

Clinical Immunology (Elsevier) USA, Japan , 29 March 2022

Virology, Immunology

Key words: COVID-19, CD8+ T cells, Cytotoxic CD4+ T cells

Organism: Human

Tissue: Lung, Lymphoid Tissue

Pathological State: COVID-19

1413
FOXK2 promotes ovarian cancer stemness by regulating the unfolded protein response pathway

Y Zhang, Y Wang, G Zhao, EJ Tanner, M Adli, D Matei

The Journal of Clinical Investigation (American Society for Clinical Investigation) USA , 29 March 2022

Oncology

Organism: Mouse

Tissue: Ovaries, Xenograft Tumor

Pathological State: Cancer

1414
Inhibition of cGAS-STING by JQ1 alleviates oxidative stress-induced retina inflammation and degeneration

M Zou, Q Ke, Q Nie, R Qi, X Zhu, W Liu, X Hu, Q Sun, JL Fu, X Tang, Y Liu, DWC LI, L Gong

Cell Death & Differentiation (Nature) China , 28 March 2022

Ophthalmology

Key words: Drug development, Epigenetics

Organism: Mouse

Tissue: Eye

1415
Food Allergen Nitration Enhances Safety and Efficacy of Oral Immunotherapy in Food Allergy

N Samadi, L Koidl, M Salzmann, M Klems, N Komatitsch, D Schaffer, E Weidmann, A Duschi, J Horejs-Hoeck, E Untersmayr

Nutrients (MDPI) Austria , 25 March 2022

Allergy Research

Key words: oral immunotherapy, food allergy, protein nitration, modulated immune response

Organism: Mouse

Tissue: Stomach

Pathological State: Allergy

1416
Effects of Magnetite Nanoparticles and Static Magnetic Field on Neural Differentiation of Pluripotent Stem Cells

AT Semeano, FA Tofoli, JC Corrêa-Velloso, AP de Jesus Santos, Á Oliveira-Giacomelli, RR Cardoso, MA Pessoa, E Lummertz da Rocha, G Ribeiro, MZR Ferrari, LV Pereira, YD Teng, DFS Petri, H Ulrich

Stem Cell Reviews and Reports (Springer) Brazil, USA , 24 March 2022

Stem Cell Research, Nanomedicine

Key words: Neural differentiation, Magnetic nanoparticles, Magnetic field, Biomagnetic effects, Embryonic stem cells, iPSCs, Dopaminergic neurons

Organism: Human

Cell Line: Induced dopaminergic neurons

1417
Exosomes from Human Placenta Choriodecidual Membrane-Derived Mesenchymal Stem Cells Mitigate Endoplasmic Reticulum Stress, Inflammation, and Lung Injury in Lipopolysaccharide-Treated Obese Mice

MD Chiang, CY Chang, HJ Shih, VL Le, YH Huang, CJ Huang

Antioxidants (MDPI) Taiwan, Vietnam , 23 March 2022

Endocrinology

Key words: lung injury, obesity, endoplasmic reticulum stress, exosomes, LPS

Organism: Mouse

Tissue: Lung

Pathological State: Obesity

1418
Gracillin Shows Potential Efficacy Against Non-Small Cell Lung Cancer Through Inhibiting the mTOR Pathway

Y Li, H Liu, X Liu, B Xiao, M Zhang, Y Luo, M Li, J Yang

Frontiers in Oncology (Frontiers Media S.A.) China , 22 March 2022

Oncology, Pharmacology

Key words: gracillin, non-small cell lung cancer, autophagy, mTOR signaling pathway, anti-tumor

Organism: Mouse

Tissue: Heart, Liver, Kidney, Lung, Xenograft Tumor

Pathological State: Cancer

1419
A chemical probe inhibitor targeting STAT1 restricts cancer stem cell traits and angiogenesis in colorectal cancer

PH Chou, CK Luo, N Wali, WY Lin, SK Ng, CH Wang, M Zhao, SW Lin, PM Yang, PJ Liu, JJ Shie, TT Wei

Journal of Biomedical Science (BMC) Taiwan, USA , 22 March 2022

Oncology

Key words: STAT1, Colorectal cancer, Stemness, Angiogenesis, 4',5,7-trihydroxyisoflavone (THIF), BODIPY-THIF

Organism: Human

Tissue: Colon

Pathological State: Cancer

1420
Planar Proton Minibeam Irradiation Elicits Spatially Confined DNA Damage in a Human Epidermis Model

H Scherthan, SQ Wagner, J Grundhöfer, N Matejka, J Müller, S Müller, S Rudigkeit, M Sammer, S Schoof, M Port, J Reindl

Cancers (MDPI) Germany , 17 March 2022

Radiotherapy

Key words: 53BP1, cell death, DNA damage, epidermis, γ-H2AX, proton minibeam radiation therapy, DNA repair, skin model

Organism: Human

Cell Line: Human reconstructed epidermis (epiCS®) models

Results 1411 - 1420 of 3421

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TissueGnostics provides advanced solutions for whole-slide imaging and image analysis in biological and clinical research. Our products help researchers to scan and analyze complex tissue samples, enabling more detailed insights into tissue structure, cellular interactions, and spatial cell landscape.

 

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