Checkpoint Molecules Predict Response to Immunotherapy in Cancer

FEATURED PUBLICATION

Checkpoint Molecules Predict Response to Immunotherapy in Cancer
cells

Heij et al. investigated the expression of checkpoint molecules in the tumor microenvironment of intrahepatic cholangio-carcinoma. They found that co-expression patterns of checkpoint molecules such as PD-L1 and TIGIT correlate with metastases and poor prognosis. TissueFAXS and StrataQuest were used to image the mIF-stained samples and assess protein expression.

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Community-developed Checklists Enhance Reproducibility of Microscopy Images

FEATURED PUBLICATION

Community-developed checklists for publishing images and image analyses
Nature Methods

QUAREP-LiMi is an initiative focused on promoting quality assessment and reproducibility for instruments and images in light microscopy. Dr. Rupert Ecker, CEO of TissueGnostics, participated in developing standardized guidelines for best practices in image communication. These checklists offer key recommendations on image formatting and annotation among others.

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AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma

FEATURED PUBLICATION

AI-Assisted Analysis of ‘Anti-/Pro-Tumor’ Profiles for Pancreatic Adenocarcinoma
Cancer Biology & Medicine

To predict survival of patients with pancreatic adenocarcinoma, Zhou et al. performed an AI-assisted comprehensive analysis of CD8+ T cells, cancer stem cells (CSCs), and tumor budding (TB). They used StrataQuest image analysis software to automatically detect and quantify tumor-infiltrating CD8+ T cells, CD133+ CSCs, and CK19+ TB.

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Characterization of the Spatial Immune Context of Lung Cancer

FEATURED PUBLICATION

Characterization of the Spatial Immune Context of Lung Cancer
International Journal of Molecular Sciences

In a recent study, Imamura et al. investigated the role of debrin-expressing tumor infiltration lymphocytes (TIL) in lung cancer. The high-end image analysis solution, StrataQuest, was used for the automatic tissue classification and localization of CD3+/debrin+ cellular phenotypes in the tumor cell nest, as well as in the stroma.

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COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma

FEATURED PUBLICATION

COL8A1 Promotes Tumor in Pancreatic Ductal Adenocarcinoma
Matrix Biology

Yan et al. investigated several collagen subtypes involved in pancreatic ductal adenocarcinoma desmoplasia. Based on this study, COL8A1 was suggested as a new marker for predicting poor chemotherapy responsiveness and survival. The TissueFAXS imaging platform and StrataQuest analysis solution were used to image and segment morphological structures.

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Erk1/2-Dependent HNSCC Cell Susceptibility to Erastin-Induced Ferroptosis

FEATURED PUBLICATION

Erk1/2-Dependent HNSCC Cell Susceptibility to Erastin-Induced Ferroptosis
cells

Savic et al. investigated the Erk 1/2 pathway role in ferroptosis induction by targeting xCT protein during the treatment of HNSCC. They found erastin to be a potent ferroptosis inducer which is strongly dependent on Erk 1/2 kinases. TissueFAXS and HistoQuest were used to image the IHC-stained samples and calculate the percentage of xCT-positive cells.

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Tumor Microenvironment Characterization of Rectal Cancer

FEATURED PUBLICATION

Case Report: Tumor Microenvironment Characterization of Rectal Cancer
Frontiers in Immunology

Song et al. published a case study investigating the genetics and tumor microenvironment of a rectal cancer patient with MSS/PD-L1-negative recurrent hepatopulmonary metastasis. TissueFAXS and StrataQuest were used to image stained tissue samples and to assess tumor infiltrating immune cells using, among others, CD4, CD8, CD163, PD1, and PD-L1 as markers.

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Adverse Effects of Single

FEATURED PUBLICATION

The impact of HIV infection on the frequencies, function, spatial localization and heterogeneity of TFRs within human lymph nodes
BMC Immunology

Mahlobo et al. published a study in BMC Immunology addressing the effect of HIV infections on frequencies, function, spatial localization and heterogeneity of T follicular regulatory cells (TFRs) in human lymph nodes. TFRs within lymph node tissues were quantified using TissueFAXS i PLUS and TissueQuest.

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Temporal changes

FEATURED PUBLICATION

Temporal changes in T cell subsets and expansion of cytotoxic CD4+ T cells in the lungs in severe COVID-19
Clinical Immunology

Kaneko et al. published a study in the Clinical Immunology journal focusing on the quantitative analysis of T-cell subset alterations in thoracic lymph nodes and lung samples of COVID-19 patients. With the help of TissueFAXS and StrataQuest, the authors were first to show the expansion of cytotoxic CD4+ T cells in the lungs of patients with severe COVID-19.

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Spatial Distribution

FEATURED PUBLICATION

Spatial distribution and functional analysis define the action pathway of Tim-3/Tim-3 ligands in tumor development
Molecular Therapy

In a recent publication in the journal Molecular Therapy, Wang et al (Cheeloo Medical College of Shandong University) combine multiplexing and TissueGnostics’ image cytometry solutions for the assessment of the expression level of Tim-3, a well-known immune checkpoint, in tumor infiltrating lymphocytes. This study nominates Tim-3 as a potential target for cancer immunotherapy.

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Multi-Antigen Imaging

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Multi-Antigen Imaging Reveals Inflammatory DC, ADAM17 and Neprilysin as Effectors in Keloid Formation
International Journal of Molecular Sciences

In a recent publication in the MDPI - International Journal of Molecular Sciences, Rath et al (University Hospital Heidelberg) combine multiplexing, TissueGnostics’ image cytometry and in-depth data mining to characterize the immune microenvironment including spatial relationships within keloid lesions. Using this approach, the authors were able to nominate potential therapeutic targets.

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SynNotch-CAR T

FEATURED PUBLICATION

SynNotch-CAR T cells overcome challenges of specificity, heterogeneity, and persistence in treating glioblastoma
Science Translational Medicine

A recent publication from the group of Choe et al. (University of California, UCSF) published in Science Translational research is exploring the therapeutic effectiveness of SynNotch-CAR T cells in a PDX glioblastoma mouse model. T cells in-situ were imaged/assessed by TissueFAXS and quantified via StrataQuest.

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CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer

FEATURED PUBLICATION

CpG Methylation Influence on Protease Serine 3 Isoforms in Lung Cancer
Acta Pharmaceutica Sinica B

Lin et al. investigated the UHRF1/DNMT1–MZF1 axis in the context of CpG methylation of protease serine 3, a protein with several isoforms that show paradoxical effects. To differentiate the isoforms, the researchers employed 7-marker multiplex staining and performed a quantitative analysis using TissueFAXS SPECTRA and StrataQuest.

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Customer Publications (A total of 3421 papers published)

Results 1321 - 1330 of 3421
1321
Hepatitis B virus X gene impacts on the innate immunity and immune‐tolerant phase in chronic hepatitis B virus infection

KC Chang, HH Chua, YH Chen, DJ Tsuei, MH Lee, CL Chiang, YM Jeng, JF Wu, HL Chen, HY Hsu, YH Ni, MH Chang

Liver International (Wiley) Taiwan , 28 June 2022

Hepathology, Immunology

Organism: Human

Tissue: Liver

Pathological State: Chronic hepatitis B

1322
Cancer-Associated Fibroblasts Promote Tumor Aggressiveness in Head and Neck Cancer through Chemokine Ligand 11 and CC Motif Chemokine Receptor 3 Signaling Circuit

WY Huang, YS Lin, YC Lin, S Nieh, YM Chang, TY Lee, SF Chen, KD Yang

Cancers (MDPI) Taiwan , 27 June 2022

Oncology

Key words: head and neck cancer, cancer-associated fibroblasts, CCL11, CCR3, tumor microenvironment

Pathological State: Cancer

Cell Line: FaDu cell lines (HTB-43 - ATCC)

1323
Single-cell transcriptomics reveals immune dysregulation mediated by IL-17A in initiation of chronic lung injuries upon real-ambient particulate matter exposure

R Zhang, S Chen, L Chen, L Ye, Y Jiang, H Peng, Z Guo, M Li, X Jiang, P Guo, D Yu, R Zhang, Y Niu, Y Zhuang, M Aschner, Y Zheng, D Li, W Chen

Particle and Fibre Toxicology (BMC) China, USA , 23 June 2022

Pulmonology

Key words: Particle matter, Chronic lung injuries, Single-cell RNA sequencing, IL-17A, Myeloid-derived suppressor cells

Organism: Mouse

Tissue: Lung

Pathological State: Pulmonary Fibrosis

1324
Rational design of synthetically tractable HDAC6/HSP90 dual inhibitors to destroy immune-suppressive tumor microenvironment

TY Wu, M Chen, IC Chen, YJ Chen, CY Chen, CH Wang, JJ Cheng, K Nepali, KH Chuang, JP Liou

Journal of Advanced Research (Elsevier) Taiwan , 22 June 2022

Oncology, Pharmacology

Key words: Cancer, Drug design, HDAC6/HSP90 dual inhibitor, Immunosensitizer, Tumor microenvironment

Organism: Mouse

Tissue: Xenograft Tumor

Pathological State: Cancer

1325
PLSCR1 promotes apoptosis and clearance of retinal ganglion cells in glaucoma pathogenesis

J Luo, Q Lian, D Zhu, M Zhao, T Mei, B Shang, Z Yang, C Liu, W Xu, L Zhou, K Wu, X Liu, Y Lai, F Mao, W Li, C Zuo, K Zhang, M Lin, Y Zhou, Y Liu, L Lu, L Zhao

Genes & Diseases (Elsevier) China , 21 June 2022

Ophthalmology

Key words: Apoptosis, Glaucoma, Phagocytosis, PLSCR1, Retinal ganglion cells

Organism: Mouse

Tissue: Eye

Pathological State: Glaucoma

1326
A diagnostic pitfall; small cell carcinoma-like features in basaloid squamous cell carcinoma of the esophagus

H Ishida, A Kasajima, T Yamauchi, R Akaishi, S Ueaki, Y Taniyama, F Fujishima, T Koike, T Kamei, AKY Lam, H Sasano

Histology and Histopathology (Griffith University) Japan, Australia, Germany , 21 June 2022

Oncology

Key words: esophagus, biopsy, basaloid squamous cell carcinoma, small cell carcinoma, diagnostic pitfall

Organism: Human

Tissue: Esophagus

Pathological State: Cancer

1327
Microtube Array Membrane Encapsulated Cell Therapy: A Novel Platform Technology Solution for Treatment of Alzheimer's Disease

SM Chen, TC Hsu, CH Chew, WT Huang, AL Chen, YF Lin, S Eddarkaoui, L Buee, CC Chen

International Journal of Molecular Sciences (MDPI) Taiwan, USA, France , 20 June 2022

Neuroscience, Pharmacology

Key words: neurodegenerative disease, Alzheimer's disease (AD), passive immunotherapy, encapsulated cell therapy, microtube array membrane (MTAMs)

Organism: Mouse

Tissue: Brain

Pathological State: Alzheimer's Disease

1328
Clinical value of urinary cytokines/chemokines as prognostic markers in patients with crescentic glomerulonephritis

J Jeon, J Park, HJ Boo, KE Yang, CJ Lee, JE Lee, K Kim, GY Kwon, W Huh, DJ Kim, HR Jang

Scientific reports (Nature) South Korea , 17 June 2022

Nephrology

Key words: Chemokines, Cytokines, Kidney diseases

Organism: Human

Tissue: Kidney

Pathological State: Crescentic Glomerulonephritis

1329
Decreased CD11c‐positive dendritic cells in the tumor microenvironment predict double‐hit/triple‐hit genotype and survival in diffuse large B‐cell lymphoma

CT Yuan, SS Chuang, PY Cheng, K Chang, H Wang, JH Tsai, JY Liau, WC Chou

The Journal of Pathology: Clinical Research (Wiley) Taiwan , 17 June 2022

Oncology

Key words: high-grade B-cell lymphoma with MYC and BCL2 and/or BCL6 rearrangements, double-hit lymphoma, triple-hit lymphoma, diffuse large B-cell lymphoma, tumor microenvironment, dendritic cell, decision curve analysis

Organism: Human

Tissue: Lymphoid Tissue

Pathological State: Cancer

1330
Urolithin B suppressed osteoclast activation and reduced bone loss of osteoporosis via inhibiting ERK/NF‐κB pathway

Y Li, Q Zhuang, L Tao, K Zheng, S Chen, Y Yang, C Feng, Z Wang, H Shi, J Shi, Y Fang, L Xiao, D Geng, Z Wang

Cell Proliferation (Wiley) China , 16 June 2022

Osteology

Organism: Mouse

Tissue: Bone

Pathological State: Osteoporosis

Results 1321 - 1330 of 3421

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TissueGnostics provides advanced solutions for whole-slide imaging and image analysis in biological and clinical research. Our products help researchers to scan and analyze complex tissue samples, enabling more detailed insights into tissue structure, cellular interactions, and spatial cell landscape.

 

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